6A 2

How Viruses Reproduce

Define the lytic pathway and latency, using λ phage and HIV as the specification contexts.

YOUR SPECIFICATION

What you need to know

  • 6.5(ii)The terms and .
Pearson specification · Issue 2, p. 31

HIV reverse transcription and T helper destruction are 6A 8. Bacterium-versus-virus structure is 6A 1. Do not turn this page into a phage-therapy protocol.

By the end, you should be able to…

  • Describe the lytic pathway as replication followed by host-cell lysis.
  • Define latency as viral nucleic acid remaining in the host without immediately making new virions.
  • Link and as two latency examples, not as identical cycles.
SPECIFICATION-ALIGNED LEARNING

Build your understanding

Lytic: copy, then burst

In the pathway the virus attaches, its nucleic acid enters, new genomes and capsids are made using the host’s resources, and the host cell lyses, releasing virions. can finish this way in a bacterium. The host is destroyed as a cell; the particles go on to other cells.

Lytic is a reproductive strategy, not a synonym for “dangerous to humans”. does not lyse a bacterium. Name the host when you use the word.

Follow the process

Lytic: attachment to the host → viral nucleic acid enters → the host’s resources make new genomes and capsids → the host cell lyses → virions are released and can infect other cells. is a different path: the nucleic acid remains, for example as a λ or an , without that immediate burst. Do not put a phage tail on HIV, or on λ phage.

Latency: the genome waits

Latency means the viral nucleic acid remains in the host cell without immediately producing new particles. In λ phage, can insert as a prophage and be copied whenever the bacterium divides: that quiet state is . An induction signal can switch the phage back to lytic replication.

HIV can insert DNA into a genome as a provirus and remain latent in some cells. That is the same specification word, latency, in a different host. Do not copy the phage tail onto HIV, and do not copy reverse transcriptase onto λ phage.

Not “cured”

If no particles are being made, the infection can still be there. Latency is why a later burst, or a later fall in T helper numbers, can appear after a quiet period. 6.6 will use that idea for HIV. Here you only need the two terms and one named example of each.

Lysogeny is the phage version of latency. You may meet the word; the specification term to define is latency.

In the lytic pathway the virus attaches, nucleic acid enters, the host builds new genomes and capsids, and the cell bursts to release virions. Latency is the alternative: the nucleic acid remains, as a lambda prophage or an HIV provirus, without that immediate burst. Do not put a phage tail on HIV. Lytic pathway or latencyThe lytic pathway makes new viruses now. Latency keeps viral nucleic acid in the host.LYTIC PATHWAY1 attachvirus binds receptorson the host cell2 enterviral DNA or RNAgets into the host3 replicatehost makes viral nucleicacid and capsid proteins4 assemble, lysenew viruses released;host cell burstsLATENCYinsertedinto host DNA: λ prophageor HIV proviruscopied with hostwhen the cell divides;no new viruses yetlater: lytica trigger can switch itto making virusesHIV is not a phage: it has an envelope and no tail, and its RNA is copied to DNA by reverse transcriptase.Latency is not immunity. The host still carries the viral genetic material.

NOT: no particles being released does not mean the virus has gone. Do not draw a phage tail on HIV.

  1. Lambda can insert as a prophage and be copied when the bacterium divides
  2. An induction signal can return lambda to the lytic pathway
  3. HIV latency is a provirus in host DNA, not a bacterial prophage
  4. Lambda does not use reverse transcriptase
  5. Lytic describes the host cell bursting, not how dangerous a virus is to people

Two traps this diagram blocks

  • Do not say an undetectable particle count means the virus has disappeared.
  • Do not copy the lambda tail onto HIV or reverse transcriptase onto lambda.

From the diagram alone

Question

Distinguish the lytic pathway from latency, using lambda phage as the example. [4]

Show a model answer

In the lytic pathway, lambda DNA enters a bacterium, new phage particles are made, and the cell bursts to release them. In latency the DNA remains as a prophage and is copied when the bacterium divides, without that immediate burst. A later signal can switch it back to lysis.

Same words, different hosts
TermWhat the nucleic acid is doingNamed example
LyticReplicating then lysing the hostλ phage bursting a bacterium
LatencyRemaining in the host without making virionsλ prophage; HIV provirus
EXAM TIPS & ADVICE

Make your reasoning visible

Build the explanation

X happens because Y, leading to Z. X: new phage particles appear outside the bacterium. Y: after attachment and entry, the host makes viral genomes and capsids and then lyses. Z: the cell is destroyed and the virions can infect further cells. Incomplete: “The virus gets angry and explodes.” Improved: “ nucleic acid enters the bacterium, new particles are assembled, and lysis releases them.” The improvement is a sequence, not a mood.

Name the host cell

“The virus is latent” is weaker than “ remains in a cell as a ”.

Lytic is a cycle, not a mood

State attachment, replication and lysis, not “it becomes angry”.

Key explanations

  • Lambda phage can complete that pathway in a bacterium. Name the host rather than calling every virus in a person.
  • In lambda, the DNA can be a copied at each bacterial division. That quiet state is . The specification word is .

Avoid this misconception

The claim: If you cannot detect particles, the virus has gone.

The correction: Latency means the nucleic acid can still be there, replicated with the host, without a current burst of virions.

BEFORE YOU START · VIRUSES

Burst now, or wait?

A virus cannot copy itself. Once inside a host cell it can take over at once and burst the cell, or its nucleic acid can sit quietly in the host for a long time.

What the model shows

λ phage infecting a bacterium by the lytic pathway or by latency, and HIV latency in a T helper cell.

What to look for

When new virions appear, and what happens to the viral DNA when the host divides.

What it tells us

Lytic means replicate, then lyse. Latency means the viral nucleic acid remains in the host without making virions, until a signal ends it.

Be careful what you claim

Illustrative times and numbers; one starting cell.

Try it in the model: press Next stage and watch the phage attach.

SPECIFICATION 6.5(ii) · MODEL

Lytic pathway and latency

Step λ phage through a bacterium by the lytic pathway, then by latency as a prophage, and compare HIV latency as a provirus in a T helper cell. Times and numbers are illustrative.

What you see
  • A host cell and a virus at each stage: λ phage and a bacterium, or HIV and a T helper cell. The strip below follows the route for the chosen pathway.
  • Two graphs over time: the number of host cells holding viral nucleic acid, and the total number of new virions released.
How to use it
  • Choose the virus and the pathway, then press Next stage. On the latency path, let the host divide, then send the signal that ends latency.
What it shows
  • Lytic: the virus replicates inside the host cell using its resources, then the cell lyses and releases virions (6.5(ii)).
  • Latency: the viral nucleic acid remains in the host cell, as a λ prophage or an HIV provirus, without immediately producing new virions (6.5(ii)).
Limits of the model
  • Times and burst sizes are typical, rounded and illustrative (λ phage about 100 virions per cell; HIV much more variable). Only one virus infects one starting cell, and every cell is assumed to behave the same way.
  • How HIV turns its RNA into DNA, and how it destroys T helper cells, is left to 6A 8. λ’s choice between the two paths is shown as your choice, not as the real regulatory switch.

Guided tour · step 1 of 8

What to do
  1. In Model, just below these steps, keep Virus and host on λ phage in a bacterium and Pathway on Lytic.
  2. Press Next stage until the bacterium bursts in the simulator.
Why

The phage attaches and injects its DNA. The bacterium’s own enzymes, ribosomes, nucleotides and ATP copy the phage DNA and make capsids and tails. The cell then lyses, releasing about 100 new virions, and is destroyed.

Model

Virus and host
Pathway
Time0 min
Cells holding viral DNA0
Virions released0

Questions

Which describes the lytic pathway?
A culture of E. coli releases no phage, yet every cell carries λ DNA in its chromosome. Which explains this?
On treatment, HIV cannot be detected in a person’s blood, but it returns when treatment stops. Which is the best explanation?
RETRIEVE · APPLY · CHECK

Check your understanding

Try each question before opening the suggested answer.

  1. Practice question

    Retrieval and explanation · suggested answer

    Define the lytic pathway.

    Show suggested answer

    The virus replicates inside the host and the host cell bursts, releasing new virions.

  2. Practice question

    Retrieval and explanation · suggested answer

    Define latency for a virus.

    Show suggested answer

    Viral nucleic acid remains in the host cell without immediately producing new virions.

  3. Practice question

    Retrieval and explanation · suggested answer

    How can λ phage switch from latency to lytic?

    Show suggested answer

    Latent phage DNA sits as a prophage. An induction signal causes it to leave that quiet state, replicate and lyse the bacterium.

STRETCH QUESTION

Take the idea further

Apply the same specification knowledge to an unfamiliar problem. Any extra assumptions are supplied in the question.

Stretch question

A diagram shows HIV RNA entering a cell and, much later, new HIV particles budding. Identify the missing latency step and one thing the diagram must not borrow from λ phage.

Show a hint

DNA in the host genome.

Explore the reasoning

Reverse transcription and insertion of viral DNA as a provirus are the latency step (detail in 6A 8). The diagram must not give HIV a head-and-tail phage capsid or a bacterial host. Budding from a T helper is not phage lysis of a bacterium, even though both can follow a latent period.

RECALL

Recall this lesson

Lesson recall questions

5 of 17 recall questions for 6.50 of 5 rated0 secure

Question 1 of 5: Compare the nucleic acid of a bacterium with that of a virus.

016.5Compare

Bacteria vs viruses

Practice question

Retrieval and explanation · suggested answer

Compare the nucleic acid of a bacterium with that of a virus.

Try this from memory first.

Practise more of these specification points

Beyond the classroom

Put your biology to work

Explore where these ideas appear in the world. Enrichment, not extra required recall.

ResearchMedicine

Phage as a laboratory switch, not a medicine

6A · How Viruses ReproduceNature Education’s bacteriophage definition treats phages as viruses that infect bacteria, with lytic bursts and, in temperate phages such as lambda, a quiet integrated state. Molecular biologists used…Specification 6.5(ii)Read & use the scienceClose article

Why this matters

Nature Education’s bacteriophage definition treats phages as viruses that infect bacteria, with lytic bursts and, in temperate phages such as lambda, a quiet integrated state. Molecular biologists used that switch as a tool. Phage therapy is a separate, contested medical idea and is not 6.5(ii) recall. A latent genome can persist while few new particles are made; lysis releases particles after replication. The two outcomes cannot be inferred merely from finding viral DNA in one sample at one time.

Back to the specification

Pearson Edexcel IAL Biology · Issue 2, February 2021 · Unit 4, pp. 29–32. The application extends beyond required recall.

  • 6.5(ii) understand what is meant by the terms lytic and latency
Read the Pearson specification

Use the science

Why is “lambda is useful in labs, therefore latency is a treatment” a category error?

Explore a possible response

Lab use exploits a genetic switch in bacteria. Latency in 6.5 is a specification term for viral nucleic acid remaining in a host, not a licensed therapy.

Explore the source

MedicineResearch

The hidden HIV reservoir

6A · How Viruses ReproduceNIAID research groups study HIV that persists in infected cells despite antiretroviral treatment. HIV can integrate genetic material into a host-cell genome; some infected cells produce little virus…Specification 6.5(ii)Read & use the scienceClose article

Why this matters

NIAID research groups study HIV that persists in infected cells despite antiretroviral treatment. HIV can integrate genetic material into a host-cell genome; some infected cells produce little virus for a time and can later contribute to renewed infection. That is a real medical consequence of latency, beyond the simplified lambda-phage switch used in the lesson. Treatment can suppress virus in blood without removing every reservoir cell. This does not mean the two viruses have identical life cycles. The common specification idea is that a viral genome may persist without continuous production of new particles.

Back to the specification

Pearson Edexcel IAL Biology · Issue 2, February 2021 · Unit 4, pp. 29–32. The application extends beyond required recall.

  • 6.5(ii) understand what is meant by the terms lytic and latency
Read the Pearson specification

Use the science

Why would a period with very low virus in blood not prove that every latent viral genome had been removed?

Explore a possible response

Latently infected cells may contain integrated viral DNA while producing little detectable virus; blood concentration does not count every reservoir cell.

Explore the source

Browse all Unit 4 connections →
END OF THE LESSON

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